Biochem · Metabolism

Glycogen Storage Diseases

One enzyme defect in glycogen metabolism. The pattern is always: can't access fuel when you need it.

Opening Challenge

A 6-month-old infant is brought to clinic for poor weight gain. On exam, the liver is massively enlarged and the abdomen is protuberant. Fasting glucose is 32 mg/dL. Labs show elevated triglycerides, elevated uric acid, and lactic acid of 4.2 mEq/L. Urine dipstick shows no ketones.

A) Von Gierke disease (glucose-6-phosphatase deficiency)
B) McArdle disease (muscle phosphorylase deficiency)
C) Pompe disease (acid maltase deficiency)
D) Cori disease (debranching enzyme deficiency)
Von Gierke (GSD Ia). Glucose-6-phosphatase deficiency blocks the final step of BOTH glycogenolysis and gluconeogenesis. Glucose-6-phosphate can't exit the liver as free glucose, causing severe fasting hypoglycemia and massive hepatomegaly from glycogen buildup. The G6P shunts into glycolysis (lactic acidosis), pentose phosphate (uric acid), and lipogenesis (hypertriglyceridemia). No ketones because the fasting response that would generate them is completely blocked.
01 · The Framework

The Pattern

Two compartments. One fuel. Different consequences when the enzyme breaks.

Two compartments: liver (glucose supplier to the body) vs. muscle (glucose consumer for contractions). Liver GSDs cause fasting hypoglycemia because the liver can't release glucose. Muscle GSDs cause exercise intolerance and cramps because muscle can't use its own glycogen during exertion. Pompe lives in lysosomes and breaks both.
Liver GSDs
Glucose Supplier Fails
Liver glycogen can't be converted to free glucose. Blood glucose crashes during fasting. Glycogen packs the liver cells.
Fasting hypoglycemia Hepatomegaly Metabolic overflow
Muscle GSDs
Glucose Consumer Fails
Muscle can't break down its own glycogen during exercise. Energy crisis during exertion. Muscle breaks down, releasing myoglobin.
Exercise cramps Myoglobinuria Normal glucose
Glycogenolysis blocked Glucose-6-P or glucose can't be released Liver: hypoglycemia Hepatomegaly from glycogen accumulation
The key discriminator: which enzyme is missing and WHERE it acts. Liver enzymes cause hypoglycemia. Muscle enzymes cause cramps and myoglobinuria. Pompe's enzyme lives in lysosomes, not the cytoplasm, so glycogen accumulates in a completely different compartment.
02 · Glucose Supplier Defects

Liver GSDs

Liver can't release glucose. The details of HOW differ by disease.

GSD Type Ia · Most Severe

Von Gierke Disease

Missing: Glucose-6-phosphatase (G6Pase).

The final step of BOTH glycogenolysis AND gluconeogenesis requires G6Pase to convert glucose-6-phosphate into free glucose. Without it, both pathways are dead ends. Glucose-6-P backs up and shunts into three overflow paths: glycolysis (lactic acidosis), pentose phosphate pathway (purines then uric acid), and lipogenesis (hypertriglyceridemia).

Clinical: Severe fasting hypoglycemia. Massive hepatomegaly and renomegaly. Doll-like facies from fat redistribution. No ketones despite prolonged fasting.

Severe hypoglycemia Lactic acidosis Hyperuricemia (gout) Hypertriglyceridemia No ketones Doll-like facies

GSD Type III · Milder

Cori Disease

Missing: Debranching enzyme (amylo-1,6-glucosidase).

Glycogen has branches. Normal glycogenolysis chews off glucose units from the ends, but when it hits a branch point, it needs the debranching enzyme to cleave the alpha-1,6 branch so the chain can continue. Without it, glycogenolysis stalls at every branch point. Only the outer chain portions are accessible, so partial glycogen breakdown occurs.

Clinical: Milder hypoglycemia than Von Gierke (some glycogen is accessible). Hepatomegaly plus myopathy (muscle glycogen also accumulates). Normal lactate, unlike Von Gierke.

Milder hypoglycemia Hepatomegaly + myopathy Normal lactate Partial glycogenolysis only

GSD Type IV · Fatal

Andersen Disease

Missing: Branching enzyme (amylo-1,4 to 1,6 transglucosidase).

Normal glycogen has many short branches, which is critical for compact storage and rapid mobilization. The branching enzyme adds those alpha-1,6 branch points during glycogen synthesis. Without it, glycogen is built as a long, poorly-branched chain resembling plant amylopectin. This abnormal glycogen is recognized as foreign by the liver, triggering a progressive inflammatory response.

Clinical: Progressive hepatic cirrhosis and liver failure. Fatal in childhood without transplant. NOT a hypoglycemia disease.

Cirrhosis Liver failure Abnormal glycogen structure Fatal childhood course

GSD Type VI · Benign

Hers Disease

Missing: Liver phosphorylase.

Liver phosphorylase is the enzyme that initiates glycogen breakdown by cleaving glucose units from the chain ends. In Hers disease, it's deficient specifically in the liver. Glycogenolysis is impaired, but gluconeogenesis still works, so hypoglycemia is mild. The course is benign.

Clinical: Mild hepatomegaly. Very mild or no hypoglycemia. Usually discovered incidentally. No significant metabolic complications.

Benign course Mild hepatomegaly Very mild hypoglycemia
Von Gierke specificity test: lactic acidosis + hyperuricemia + hypertriglyceridemia + NO ketones is essentially pathognomonic. Cori gives milder findings with NORMAL lactate. Andersen gives cirrhosis, not hypoglycemia. Hers is benign. If the board gives you a sick infant with ALL of these findings, it's Von Gierke.
02B · Flip Cards

GSD Villain Lineup

Tap to flip. Enzyme, mechanism, key clue, and board move on the back.

GLYCOGEN METABOLISM: WHERE EACH ENZYME ACTS Glucose-6-P (cytoplasm) Branching enz. Andersen (IV) GLYCOGEN Core substrate Debranching enz. Cori (III) Glucose-6-P (post-breakdown) G6Pase Von Gierke (Ia) Free Glucose Blood glucose ↑ LYSOSOME Acid maltase (GAA) Pompe (II): GAA missing Glycogen packs lysosomes MUSCLE Myophosphorylase McArdle (V): cramps Von Gierke (G6Pase) Cori (Debranching) Andersen (Branching) Pompe (Lysosomal) McArdle (Muscle) Liver enzymes → hypoglycemia when blocked. Muscle enzymes → cramps when blocked. Pompe → lysosomal overflow.
😵
Von Gierke
GSD Type Ia
Tap to reveal

Missing Enzyme

Glucose-6-phosphatase (G6Pase) · blocks both glycogenolysis AND gluconeogenesis at the final step

Key Clue

Lactic acidosis + hyperuricemia + hypertriglyceridemia + NO ketones · doll-like facies, massive hepatomegaly

Why No Ketones?

G-6-P backs up into lipogenesis (makes fat, not ketones). Severe hypoglycemia but paradoxically no ketone production.

Treatment

Cornstarch (slow glucose release) · raw cornstarch q3-4h to prevent hypoglycemia

Lactic acidosis + NO ketones + infant = Von Gierke first

🧒
Pompe
GSD Type II
Tap to reveal

Missing Enzyme

Acid alpha-1,4-glucosidase (acid maltase / GAA) · lives in lysosomes

Key Clue

Massive cardiomegaly + floppy infant + macroglossia · short PR interval on ECG · normal blood glucose

Why Unique

Only GSD that is lysosomal, not cytoplasmic. Only GSD with cardiac involvement. Only GSD with approved enzyme replacement.

Treatment

Alglucosidase alfa (Myozyme/Lumizyme) · only GSD with ERT · start before cardiac damage

Floppy infant + cardiomegaly + normal glucose = Pompe

🏃
McArdle
GSD Type V
Tap to reveal

Missing Enzyme

Muscle phosphorylase (myophosphorylase) · muscle-only, liver is normal

Key Clue

Exercise cramps + myoglobinuria + "second wind" · no lactate rise on forearm ischemic exercise test · normal glucose

Second Wind

After brief rest, fatty acid oxidation + hepatic glucose release restores fuel. Patient can continue exercise. Classic board feature.

Test

Forearm ischemic exercise test: no lactate rise (normally goes up 3-5x). Ammonia DOES rise (amino acids still metabolized).

Second wind + no lactate rise = McArdle (V)

🪀
Cori
GSD Type III
Tap to reveal

Missing Enzyme

Debranching enzyme (amylo-1,6-glucosidase) · glycogenolysis stalls at every branch point

Key Clue

Milder hypoglycemia + hepatomegaly + myopathy · NORMAL lactate (unlike Von Gierke) · both liver AND muscle affected

Why Milder

Only the outer chain glucose is inaccessible. Gluconeogenesis is intact (G6Pase works). So some glucose still gets to blood.

Board Discriminator

Von Gierke vs. Cori: lactate · elevated in Von Gierke, normal in Cori. Myopathy only in Cori.

Liver GSD + normal lactate + myopathy = Cori (III)

The one rule: Liver GSDs = fasting hypoglycemia + hepatomegaly (because liver can't release glucose). Muscle GSDs = exercise cramps + myoglobinuria + normal glucose (because liver is fine). Pompe = lysosomal + cardiomegaly + normal glucose.
03 · Glucose Consumer Defects

Muscle GSDs

Muscle can't use its own glycogen during exercise. Liver is fine. Glucose is normal.

GSD Type V · Classic

McArdle Disease

Missing: Muscle phosphorylase (myophosphorylase).

Skeletal muscle cannot break down its own glycogen at all. During the first 5-10 minutes of exercise, ATP from non-glycogen sources (phosphocreatine, circulating glucose) is depleted faster than it can be replaced. Cramping and myoglobinuria result from muscle cell breakdown.

Second wind: After brief rest, fatty acid oxidation ramps up in muscle AND the liver releases glucose into blood. Fuel supply is restored by non-glycogenolytic routes, and the patient can continue exercise without further pain. This is the board discriminator.

Forearm ischemic exercise test: No rise in venous lactate after forearm exercise under ischemic conditions. Normally, muscle glycogenolysis generates pyruvate then lactate. Without it, lactate doesn't rise.

Exercise cramps Myoglobinuria "Second wind" phenomenon Normal glucose No lactate rise on forearm test No hypoglycemia

GSD Type VII · McArdle Mimic

Tarui Disease

Missing: Muscle phosphofructokinase (PFK).

PFK catalyzes one of the committed steps of glycolysis (fructose-6-phosphate to fructose-1,6-bisphosphate). Without it, muscle can't run glycolysis even when glucose enters the cell, so the fuel crisis during exercise is the same as McArdle despite a different enzyme.

Distinguisher from McArdle: PFK is also expressed in red blood cells, so Tarui disease causes a compensated hemolytic anemia in addition to exercise intolerance. The forearm ischemic exercise test also shows no lactate rise, just like McArdle.

Clinical: Exercise intolerance, painful cramps, myoglobinuria. Hemolytic anemia (mild). Reticulocytosis.

Exercise cramps Myoglobinuria Hemolytic anemia No lactate rise Like McArdle + hemolysis
Muscle GSD board logic: exercise cramps + myoglobinuria + no hypoglycemia = muscle GSD. McArdle vs Tarui: if the stem mentions hemolytic anemia or elevated bilirubin, it's Tarui. If the stem mentions "second wind" specifically, it's McArdle. Both give no lactate rise on the forearm test.
04 · The Special Case

Pompe Disease (GSD II)

The one GSD that lives in the lysosomes. Everything else is different because of that.

GSD Type II · Lysosomal

Pompe Disease

Missing: Acid alpha-1,4-glucosidase (acid maltase, GAA).

This enzyme lives in lysosomes and degrades the small amounts of glycogen that get sequestered into lysosomes as part of normal autophagy. Without it, glycogen accumulates inside lysosomes of every tissue. The lysosomes swell, disrupt cell structure, and cause progressive organ failure.

Infantile form: Massive cardiomegaly (the biggest board clue). Profound generalized hypotonia ("floppy infant"). Macroglossia. Respiratory failure. Short PR interval + massive QRS voltage on ECG. Death within the first year without treatment. Glucose is normal.

Adult/late-onset form: Proximal myopathy that mimics limb-girdle muscular dystrophy. No cardiac involvement. Slowly progressive respiratory insufficiency. Presents in teens to adulthood. Confirmed by acid maltase activity in dried blood spot or muscle biopsy with PAS-positive vacuoles.

Treatment: Enzyme replacement therapy with alglucosidase alfa (Myozyme/Lumizyme). The only GSD with approved ERT. Must start before irreversible cardiac damage.

Massive cardiomegaly Floppy infant Macroglossia Normal glucose ERT available Lysosomal glycogen Adult: proximal myopathy
Why Pompe is different from every other GSD:
1. Glycogen is in LYSOSOMES, not cytoplasm.
2. Massive cardiomegaly in infants is unique to Pompe.
3. The only GSD with approved enzyme replacement therapy.
4. Adult form mimics muscular dystrophy, not a metabolic crisis.
5. Glucose is normal because the liver's cytoplasmic glycogen metabolism is intact.
Board trap: Pompe infantile looks nothing like other lysosomal storage diseases because there's no hepatosplenomegaly and no neurodegeneration (at first). The massive cardiomegaly in a floppy infant with normal glucose is the entire diagnosis. ERT with alglucosidase alfa is the treatment answer.
05 · Side by Side

Comparison Table

Every GSD. One view. Scroll horizontally on mobile.

Disease GSD # Missing Enzyme Tissue Key Finding Distinguisher
Von Gierke Ia Glucose-6-phosphatase Liver + Kidney Severe fasting hypoglycemia + massive hepatomegaly Lactic acidosis + hyperuricemia + hypertriglyceridemia + NO ketones
Pompe II Acid alpha-glucosidase (acid maltase) Lysosomes (all tissues) Cardiomegaly + floppy infant Lysosomal glycogen. ERT available. Normal glucose. Adult form: proximal myopathy.
Cori III Debranching enzyme (amylo-1,6-glucosidase) Liver + Muscle Milder hypoglycemia + hepatomegaly + myopathy Normal lactate (unlike Von Gierke). Partial glycogenolysis works.
Andersen IV Branching enzyme (amylo-1,4 to 1,6 transglucosidase) Liver Progressive cirrhosis, liver failure Abnormal long-chain glycogen (amylopectin-like). Fatal in childhood. No hypoglycemia.
McArdle V Muscle phosphorylase (myophosphorylase) Skeletal muscle Exercise cramps + myoglobinuria "Second wind". No hypoglycemia. No lactate rise on forearm ischemic test.
Hers VI Liver phosphorylase Liver Mild hepatomegaly Benign. Very mild or no hypoglycemia. Incidental finding.
Tarui VII Phosphofructokinase (PFK) Muscle + RBCs Exercise cramps + myoglobinuria Like McArdle but also hemolytic anemia. RBCs also lack PFK.
Board shortcut: Von Gierke = lactic acidosis + hyperuricemia + NO ketones (very specific triad). McArdle = exercise cramps + myoglobinuria + second wind (also very specific). Pompe = cardiomegaly in infant OR adult-onset proximal myopathy. Andersen = infant with cirrhosis, not hypoglycemia. Tarui = McArdle + hemolysis.
06 · Retrieval Practice

Quiz

Four board-style questions. Original vignettes. Pick your answer before reading the explanation.

Question 1 of 4

A 6-month-old girl is brought in because of poor feeding and failure to thrive. Physical exam reveals massive hepatomegaly and mild hypotonia. Fasting glucose is 28 mg/dL. Labs show elevated lactic acid, elevated uric acid, and elevated triglycerides. Urine shows no ketones.

Which enzyme deficiency explains ALL of these lab findings?
ADebranching enzyme (amylo-1,6-glucosidase)
BGlucose-6-phosphatase
CLiver phosphorylase
DBranching enzyme (amylo-1,4 to 1,6 transglucosidase)
Tempting to pick debranching enzyme deficiency since it also causes hepatomegaly and hypoglycemia and sounds structurally similar, but the severity of the metabolic overflow (lactic acidosis, hyperuricemia, hypertriglyceridemia) points to a complete exit block for glucose, not a partial one. Think of G6Pase as the factory's only exit door for glucose: without it, glucose-6-phosphate backs up in the warehouse and workers start loading it onto every other outbound truck available (glycolysis to lactate, pentose shunt to uric acid, lipogenesis to triglycerides). Correct: B

Von Gierke disease (GSD Ia). G6Pase is required for the final step of BOTH glycogenolysis and gluconeogenesis. Without it, glucose-6-phosphate cannot be converted to free glucose. G6P shunts into glycolysis (lactic acidosis), pentose phosphate pathway (purines to uric acid), and lipogenesis (hypertriglyceridemia).

Break it down: Debranching enzyme deficiency (Cori, GSD III) gives milder hypoglycemia and normal lactate. Liver phosphorylase (Hers, GSD VI) causes mild benign hepatomegaly without the metabolic overflow. Branching enzyme (Andersen, GSD IV) causes cirrhosis, not hypoglycemia.
Question 2 of 4

A 19-year-old male presents with muscle cramps and dark brown urine that appear within 30 minutes of playing basketball. He has no symptoms at rest. Laboratory studies show elevated creatine kinase and myoglobin in the urine. He notes that if he rests briefly after the cramps start, he can often continue exercising without further pain.

What is the underlying mechanism of his "second wind" phenomenon?
AIncreased glycolysis provides additional ATP after the initial depletion
BPyruvate carboxylase activates an alternate anaplerotic pathway
CFatty acid oxidation and hepatic glucose output supply fuel once muscle glycogenolysis fails
DIncreased GLUT4 translocation allows glucose uptake despite the enzyme deficiency
Tempting to say increased glycolysis explains the second wind since glucose is available in the bloodstream and GLUT4 uptake is intact in McArdle, but local glucose oxidation alone cannot compensate for the failed muscle glycogenolysis. Think of the McArdle muscle as a factory with a locked internal fuel tank (glycogen): when the emergency reserves run out, the plant halts until an external delivery truck arrives (hepatic glucose output) and a second fuel source activates (fatty acid oxidation). That external resupply IS the second wind. Correct: C

McArdle disease (GSD V). Muscle phosphorylase is absent, so skeletal muscle cannot break down its own glycogen. During the first minutes of exercise, available ATP from phosphocreatine and circulating glucose is consumed, causing cramps. The "second wind" occurs because after a brief rest, the liver increases glucose output and fatty acid oxidation ramps up in muscle. Both of these fuel sources bypass the glycogenolysis block entirely.

Break it down: Glycolysis can run on incoming glucose but still can't supplement from glycogen. GLUT4 translocation is intact in McArdle, meaning glucose can enter the cell, but the total fuel delivery from the liver is limited and delayed. Pyruvate carboxylase is a gluconeogenic enzyme in liver and doesn't apply here.
Question 3 of 4

An 8-month-old boy has had progressive difficulty feeding and breathing since birth. His heart rate is 156 bpm. Chest X-ray shows massive cardiomegaly. He is profoundly hypotonic. ECG shows short PR interval and massive QRS complexes. Glucose is normal between feedings. Liver is normal size.

Enzyme replacement with which agent addresses the primary defect?
AImiglucerase (beta-glucocerebrosidase)
BAlglucosidase alfa (acid alpha-glucosidase)
CIdursulfase (iduronate-2-sulfatase)
DLaronidase (alpha-L-iduronidase)
Tempting to pick imiglucerase since Gaucher disease is the most tested lysosomal storage disease with enzyme replacement therapy, but imiglucerase replaces glucocerebrosidase, not acid maltase. Think of lysosomal storage diseases as different warehouses with different broken forklifts: you have to send the exact replacement model. Alglucosidase replaces acid maltase (Pompe's broken forklift); imiglucerase replaces glucocerebrosidase (Gaucher's broken forklift). The cardiac-predominant floppy infant with normal glucose tells you which warehouse you are in. Correct: B

Pompe disease (GSD II). The massive cardiomegaly in a floppy infant with hypotonia and normal glucose is the pathognomonic presentation. Acid alpha-1,4-glucosidase (acid maltase) deficiency causes glycogen accumulation in lysosomes of all tissues, with the heart and skeletal muscle most severely affected. Alglucosidase alfa (Lumizyme/Myozyme) is the approved enzyme replacement therapy.

Break it down: Imiglucerase treats Gaucher disease (glucocerebroside accumulation). Idursulfase treats Hunter syndrome (MPS II, iduronate sulfatase deficiency). Laronidase treats Hurler syndrome (MPS I, alpha-L-iduronidase deficiency). The normal glucose and cardiac-predominant presentation with normal liver size distinguish Pompe from all liver-based GSDs.
Question 4 of 4

A 3-year-old boy has had hepatomegaly since infancy. He recently developed ascites and is found to have elevated liver enzymes. Liver biopsy shows cirrhosis with PAS-positive inclusions in hepatocytes. Analysis reveals an abnormal branching pattern in stored glycogen: the chains are unusually long and poorly branched.

Which enzyme is deficient in this condition?
AMuscle phosphorylase
BGlucose-6-phosphatase
Calpha-1,4-glucan branching enzyme
DDebranching enzyme (amylo-1,6-glucosidase)
Tempting to pick debranching enzyme since both Cori and Andersen affect glycogen branch structure and both cause liver disease, but Cori causes milder disease without cirrhosis while Andersen's abnormal amylopectin-like glycogen triggers a hepatic foreign-body inflammatory response. Think of Andersen's unbranched glycogen as delivering tree logs instead of properly chopped firewood to the liver's furnace: the logs cannot be processed, pile up as foreign material, and the liver's immune cells attack them progressively until fibrosis sets in. Correct: C

Andersen disease (GSD IV). Branching enzyme deficiency results in glycogen with abnormally long, poorly-branched chains that resemble plant amylopectin. This structurally abnormal glycogen is treated as a foreign body by the liver, triggering progressive inflammation, fibrosis, and cirrhosis. Liver failure in childhood is the result without transplant.

Break it down: Muscle phosphorylase (McArdle, GSD V) causes exercise intolerance with myoglobinuria, not cirrhosis. Glucose-6-phosphatase (Von Gierke) causes severe hypoglycemia and massive hepatomegaly, but NOT cirrhosis. Debranching enzyme (Cori, GSD III) causes partial glycogenolysis with milder liver disease, myopathy, and normal lactate.
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Board-Style Walkthrough

Board-Style Walkthrough

Original board-style vignettes. Shuffled, never-repeat, full Chicago explanations.